PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM63911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 332aa MW: 36947.3 Da PI: 6.4076 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.3 | 2e-06 | 211 | 254 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + r R +ri ++ +eL +l+P +K++ a +L+ A +Y+k Lq OWM63911.1 211 LAARERQKRIADKTHELGKLIPGG-----TKMNTAGMLQSAFNYVKFLQ 254 66799*****************87.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MSISSYSMLN WPAVPDQYHG IVTSSQPVVE APPQLLMSTA FPCYGNVDKA TAFCPYCGLN 60 NNWCNEVVVK ADPLFFNKGY CYNYINDDMV ELADDHCGLS YPRIAITITP TATVQQQQLL 120 SGPGRLSLYD NDTVNADQFY HCRVPPDQPP NRDKPCCFDL PDLLFPQGNM YPAVQPPVLH 180 SNGVSCKPVT IVEPDVERSK PRLRRVSAQS LAARERQKRI ADKTHELGKL IPGGTKMNTA 240 GMLQSAFNYV KFLQSQVHIL QLLASFDPCQ VQENDPVEEV DKEKLGRPAN VLGVVASVQE 300 KLYKEGSCII PPSLAESLIH HHPRLQNLLQ LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30670.1 | 5e-22 | bHLH family protein |