PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63684.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 282aa MW: 31952.2 Da PI: 6.5032

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.6	2.5e-36	7	145	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89 pG+ FhPtd+el+++yLk+++ ++ +++++++++y+++P++Lp+ k+k++ +ew fF+ r+ ky++++r++r + + gyWk t k OWM63684.1 7 PGLDFHPTDDELLTYYLKQRILNHFqdptrSANAHTVPDIELYTMHPKELPRqfkrlaKIKSNGREWVFFCARKGKYRNSSRAERtVPNIGYWKVTSKL 105 9*****************9887656654222245**********954888888888999****************66679***** PP NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+v+s+ +g+++g k++L+fy+ + ++g kt+W++hey+l OWM63684.1 106 KKVKSEtTGNEIGSKNILTFYERSPSNGAKTNWILHEYHL 145 9978899**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MEIPNIPGLD FHPTDDELLT YYLKQRILNH FQDPTRSANA HTVPDIELYT MHPKELPRQF 60 KRLAKIKSNG REWVFFCARK GKYRNSSRAE RTVPNIGYWK VTSKLKKVKS ETTGNEIGSK 120 NILTFYERSP SNGAKTNWIL HEYHLNASSL GYNVSEMPFV VCRLYNKSGN CDESTCHGDE 180 STNCAAAATS ETHATGYQFT SPELVSEEEI WQSLPQIQQL PCNLSNYGNY TGRAEEDLYT 240 DEAGSSSGGY YTGGSSSNCY YPSNDETSYY QPCHGGWGSH YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	2e-30	NAC family protein