PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM63486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 24612.5 Da PI: 10.2534 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.5 | 2.1e-12 | 45 | 86 | 3 | 49 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 ++h+e+ErrRR+riN +++Lr+l+P+ K++Ka+ L ++++ OWM63486.1 45 KNHSEAERRRRQRINAHLATLRDLVPST-----DKMDKATLLAEVIN 86 58*************************7.....6********99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MASRGGSSAK SQSLVLDSEK GELVKAPVRV AKKNVSEAKA KLALKNHSEA ERRRRQRINA 60 HLATLRDLVP STDKMDKATL LAEVINQVKV QKKTALESIR GLLIPLDSEE LTVETCDDIY 120 QHATVSFRAS LCCKYRPDLF ADLRQAVSSL GTMKLMKAEI STLEDWLKIV FLFTSCRDEP 180 RSAHGILSSS IYRSLSSVLD KAPASLEYSP KVAPSRKRQK VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 5e-24 | bHLH family protein |