PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63380.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 386aa MW: 42669.7 Da PI: 6.5927

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.9	7.7e-34	72	163	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++ei++d++++ ++sws nsf+v+d+++f++++LpkyFkhsnf+SF+RQLn+YgF+kv++++ weF+++ F g+++ll++ik OWM63380.1 72 FLTKTFEIVDDPSTDGVVSWSVARNSFIVWDPHRFSSTLLPKYFKHSNFSSFIRQLNTYGFRKVDSDR---------WEFANEGFLGGQRHLLKTIK 159 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ OWM63380.1 160 RRRH 163 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEGGGRLRTA KEEEQTQTFS PSSSHVKSTI SGGGCGGSCG GHSSSSSSSC ANQNRDLPRP 60 MEGLSEAGPP PFLTKTFEIV DDPSTDGVVS WSVARNSFIV WDPHRFSSTL LPKYFKHSNF 120 SSFIRQLNTY GFRKVDSDRW EFANEGFLGG QRHLLKTIKR RRHVSQHQRS PGSGGSCLEL 180 GHFGMEPELE RLKRDRSVLM SEIVKLRQQQ QEARGHMLTV ETRLQSTERR QQQMLSFLAR 240 ALSNPGIIGR MVHHSATGGT REICRAERGR KRRLMDRPSS EDLRLEEEVL MEMGRTGGLA 300 GMQGGSGTAG PAPPRRGNSE TVNEMILEEL LSEDLMRGDP EEEILVGDQP EADAEVEDLI 360 PGPAAWGEGL EDVVDQKGRL RSNELG

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEGGGRLRTA KEEEQTQTFS PSSSHVKSTI SGGGCGGSCG GHSSSSSSSC ANQNRDLPRP  60
MEGLSEAGPP PFLTKTFEIV DDPSTDGVVS WSVARNSFIV WDPHRFSSTL LPKYFKHSNF  120
SSFIRQLNTY GFRKVDSDRW EFANEGFLGG QRHLLKTIKR RRHVSQHQRS PGSGGSCLEL  180
GHFGMEPELE RLKRDRSVLM SEIVKLRQQQ QEARGHMLTV ETRLQSTERR QQQMLSFLAR  240
ALSNPGIIGR MVHHSATGGT REICRAERGR KRRLMDRPSS EDLRLEEEVL MEMGRTGGLA  300
GMQGGSGTAG PAPPRRGNSE TVNEMILEEL LSEDLMRGDP EEEILVGDQP EADAEVEDLI  360
PGPAAWGEGL EDVVDQKGRL RSNELG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	161	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-103	HSF family protein