PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63200.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family FAR1
Protein Properties Length: 170aa    MW: 18861.2 Da    PI: 6.1371
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1773.6e-2450140290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 
                 fY  YA++vGF +r ++ ++s+++ge+++r +vC ++g +++++k t+k+ ++r+ tr g ka+++v++ek  +gkw+vt++++eHnH+l+
  OWM63200.1  50 FYGVYATRVGFVMRLDEFRRSTHEGEVVWRMLVCDRKGIQRSRQKGTVKNGKPRVITRAGGKASIVVELEKekSGKWVVTEFVKEHNHPLV 140
                 9******************************************************************9998889***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MDGEQTHVSE DGNLVESSSG REEGPVIESG PCLEPFVGME FESEEAAQAF YGVYATRVGF  60
VMRLDEFRRS THEGEVVWRM LVCDRKGIQR SRQKGTVKNG KPRVITRAGG KASIVVELEK  120
EKSGKWVVTE FVKEHNHPLV VAPAYSPNVL PSQTPVSASL RASESERRLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-43FAR1 family protein