PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63104.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 656aa MW: 73439.6 Da PI: 9.6439

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3e-08	178	233	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 r++WTt+E+e l ++v++l + W++I +Rt+ ++k++w + OWM63104.1 178 RLNWTTQEEEMLEEGVRKLSDKemknvPWRKILDFGSrtfhSTRTPSDLKDKWKNM 233 89****************99******987778888**********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MLVCAETGCP VAFHVKCFSR EPKFDQSRRF YCPYCFYKRT TAKLEKLKRK ATQAKLDLLG 60 FLDAGGTDRC KKPANASTSR RENQGNVAVS PEKHANASAS RDENRGDDAV SPQKQANASA 120 SRNKNHGNDD VSLDKAGSAA GKGPCLEKEV ANAERSNPRK QSPKEVKKAA ISKPRRKRLN 180 WTTQEEEMLE EGVRKLSDKE MKNVPWRKIL DFGSRTFHST RTPSDLKDKW KNMQRKSMMD 240 NPLGKEPIED EIGEQESANG PEPKLRKCRD FGLKVYCVKT HSTPFFFFFF FFFLPAPYPD 300 GESSAAATIP PMASFTSPIS SQLLPRPKTH TFAFPNFASP QTPRHALAPK PARLPSIHSL 360 TAPAKASKNS SSTNQPTSQT KGKKQTRVQE EKQDETVEVE EDLPWIQEKA LDLVEFTGSV 420 TQAIPGPRVG TSSLPWILAV PLAYVGVSFV IAFVKTVKRF SSPREKRRRL VNKNAMLCKS 480 IDELFKKGMD EVQHSALTGL AKKTGFGMEE ILRKYVRYVL NEKQFNPELI ASLIRLRKAS 540 MLEDPQVAEI LNDISRRIVR DKGPVVMDMS GYSEKGFKRK LAVQALFGKV FYLSELPEFC 600 SQDSSLIVKE IFGVTDDDAD KLRLHTLSES GDMGSLEKMV DDSDSEGSDE ESEESL

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MLVCAETGCP VAFHVKCFSR EPKFDQSRRF YCPYCFYKRT TAKLEKLKRK ATQAKLDLLG  60
FLDAGGTDRC KKPANASTSR RENQGNVAVS PEKHANASAS RDENRGDDAV SPQKQANASA  120
SRNKNHGNDD VSLDKAGSAA GKGPCLEKEV ANAERSNPRK QSPKEVKKAA ISKPRRKRLN  180
WTTQEEEMLE EGVRKLSDKE MKNVPWRKIL DFGSRTFHST RTPSDLKDKW KNMQRKSMMD  240
NPLGKEPIED EIGEQESANG PEPKLRKCRD FGLKVYCVKT HSTPFFFFFF FFFLPAPYPD  300
GESSAAATIP PMASFTSPIS SQLLPRPKTH TFAFPNFASP QTPRHALAPK PARLPSIHSL  360
TAPAKASKNS SSTNQPTSQT KGKKQTRVQE EKQDETVEVE EDLPWIQEKA LDLVEFTGSV  420
TQAIPGPRVG TSSLPWILAV PLAYVGVSFV IAFVKTVKRF SSPREKRRRL VNKNAMLCKS  480
IDELFKKGMD EVQHSALTGL AKKTGFGMEE ILRKYVRYVL NEKQFNPELI ASLIRLRKAS  540
MLEDPQVAEI LNDISRRIVR DKGPVVMDMS GYSEKGFKRK LAVQALFGKV FYLSELPEFC  600
SQDSSLIVKE IFGVTDDDAD KLRLHTLSES GDMGSLEKMV DDSDSEGSDE ESEESL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	466	470	KRRRL