PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM62981.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 562aa MW: 61507.5 Da PI: 6.4541

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM62981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	2e-30	264	323	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ OWM62981.1 264 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHP 323 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MKESLMAMEK RAHDDVSNGD DHLEELLPTV ENRSPMRKEN DQLKTSSPHR QLTISKIENS 60 PSEPNPSLSP SRGIEQDDQI ESARAEMGEM REENERLKMY LERIMRDYKE LQMQFFNIVK 120 QEDGRQQQAV NPGSGAHQEL EESDLVSLNL GWVSGSSSVG KDKKRKLSAL EIKDQKINDD 180 QQGLALSLDC NFEAAKSGTV ESLAKNMNPE KENSSEDPKE DAGEMWPPSK VLKTMRSGED 240 EVSQQNPAKK TRVCVRARCN TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK 300 QVQRCAEDMS ILITTYEGTH NHPLPVSATA MASTTSAAAS MLLSGSLTSE SSQAGSQPIA 360 AATDLHGLNF YLSDPSRSKQ FYLPNSSLMT PSPSHPTITL DLTSGPPVSS SASSYLNRFF 420 SATSRSNSST SLNFHSSEPC ALPIPWGNGL LNYGTTSHQP FNKSDPQESF LHHLPSLQKT 480 NNNPQDSIAA AAKAITTEPN FQSALAAALK SIIGVAGSAA GGTTLALGNY QGGSGVDIFS 540 QKSSWNESFW PRAEISMDQR HK

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MKESLMAMEK RAHDDVSNGD DHLEELLPTV ENRSPMRKEN DQLKTSSPHR QLTISKIENS  60
PSEPNPSLSP SRGIEQDDQI ESARAEMGEM REENERLKMY LERIMRDYKE LQMQFFNIVK  120
QEDGRQQQAV NPGSGAHQEL EESDLVSLNL GWVSGSSSVG KDKKRKLSAL EIKDQKINDD  180
QQGLALSLDC NFEAAKSGTV ESLAKNMNPE KENSSEDPKE DAGEMWPPSK VLKTMRSGED  240
EVSQQNPAKK TRVCVRARCN TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK  300
QVQRCAEDMS ILITTYEGTH NHPLPVSATA MASTTSAAAS MLLSGSLTSE SSQAGSQPIA  360
AATDLHGLNF YLSDPSRSKQ FYLPNSSLMT PSPSHPTITL DLTSGPPVSS SASSYLNRFF  420
SATSRSNSST SLNFHSSEPC ALPIPWGNGL LNYGTTSHQP FNKSDPQESF LHHLPSLQKT  480
NNNPQDSIAA AAKAITTEPN FQSALAAALK SIIGVAGSAA GGTTLALGNY QGGSGVDIFS  540
QKSSWNESFW PRAEISMDQR HK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-72	WRKY family protein