PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM62575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C3H | ||||||||
Protein Properties | Length: 162aa MW: 18106.7 Da PI: 11.0323 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.9 | 1.7e-08 | 139 | 159 | 2 | 23 |
-S---SGGGGTS--TTTTT-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkF 23 k+ lCr+f + G C++Gd+CkF OWM62575.1 139 KRQLCRHFNK-GMCHFGDNCKF 159 899*******.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MKKKEKVNCA RSGSTFTMKN NTVRAPKAGP FVTNSDLRIP PIALGLVRNR AVHAHGPQVP 60 IILQHPQGGQ DQHHHAAWKN PGISQSFPGR KQVLRHNYLG SPTLCPSNSA HIQNRDGHPL 120 ANVNQYPRIG TQGRAESHKR QLCRHFNKGM CHFGDNCKFL YE |