PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g997600.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 445aa MW: 50310.9 Da PI: 6.3568 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.4 | 4.2e-14 | 202 | 247 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 ykGVr++k +gr++AeIrdp + r +lg+f taeeAa+ + + +++ Pd.00g997600.m01 202 YKGVRRRK-WGRYAAEIRDPI----QrCRKWLGTFATAEEAAAVYQKKKLE 247 9****998.**********83....359**************999877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MSSRFHLLTG AQKKLWTSYH CLSCTLVLLS TFCMQYWSHG HTLKQSSLLF SMPLRSKRSC 60 SGLECFGDYF RKQFSISILG LRGFDLKKMP GFKTLVLNQH VKLSKLKTEQ PNKEENTSSV 120 KRIRIIYNDP DATDSSSDDE EYDGKEDRLL HDKRFVSEVL VVDTKYEPSA DVLSHCKTNG 180 GKIGLSMNFY DCKKTKRSSS MYKGVRRRKW GRYAAEIRDP IQRCRKWLGT FATAEEAAAV 240 YQKKKLEFDS IQSLGKTQRH YQNLQLSDKD KGAFESFQLT ERTKHEFQGI PLSEESQDSL 300 GDADIETFSA EETKRVFCHP SPSSVLEISG TASLGIGLKQ VKEGSSVGVF GGEGSVQPFF 360 EEDLSILKFP EEPMLPLDTE QLDLGCGENY MFSSLDQFFD GMSDIVDYPA FNDGNGKAIC 420 LPTLDSDFGQ QDFAWIDQNL NMACP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 203 | 209 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 6e-25 | ERF family protein |