PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g997600.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 445aa    MW: 50310.9 Da    PI: 6.3568
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g997600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.44.2e-14202247352
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                       ykGVr++k +gr++AeIrdp     +  r +lg+f taeeAa+ + + +++
  Pd.00g997600.m01 202 YKGVRRRK-WGRYAAEIRDPI----QrCRKWLGTFATAEEAAAVYQKKKLE 247
                       9****998.**********83....359**************999877765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MSSRFHLLTG AQKKLWTSYH CLSCTLVLLS TFCMQYWSHG HTLKQSSLLF SMPLRSKRSC  60
SGLECFGDYF RKQFSISILG LRGFDLKKMP GFKTLVLNQH VKLSKLKTEQ PNKEENTSSV  120
KRIRIIYNDP DATDSSSDDE EYDGKEDRLL HDKRFVSEVL VVDTKYEPSA DVLSHCKTNG  180
GKIGLSMNFY DCKKTKRSSS MYKGVRRRKW GRYAAEIRDP IQRCRKWLGT FATAEEAAAV  240
YQKKKLEFDS IQSLGKTQRH YQNLQLSDKD KGAFESFQLT ERTKHEFQGI PLSEESQDSL  300
GDADIETFSA EETKRVFCHP SPSSVLEISG TASLGIGLKQ VKEGSSVGVF GGEGSVQPFF  360
EEDLSILKFP EEPMLPLDTE QLDLGCGENY MFSSLDQFFD GMSDIVDYPA FNDGNGKAIC  420
LPTLDSDFGQ QDFAWIDQNL NMACP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203209KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-25ERF family protein