PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g996650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 707aa MW: 78209.5 Da PI: 10.5752

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g996650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.6	7.8e-10	45	91	2	41
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqck 41 +W t+E++ll++avk++G ++W+++a +++ + t+++ck Pd.00g996650.m01 45 SSWGTWEELLLACAVKRHGINDWDSVAMELQaktslphLLTTAYNCK 91 57*****************************8888888777888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MIANFFTTWV ILRHSGYDDN MMILFGRNFT QKRRKLQDQT TTFTSSWGTW EELLLACAVK 60 RHGINDWDSV AMELQAKTSL PHLLTTAYNC KLNIPWLDDL RKLRVAQLRQ ELHRNDVSIV 120 SLQLKVKRLE EEREDSSKDD EAKPDLEEED SKGHRSENDK NIQDEPDRSK PDQENQSVNG 180 SNSTCSKSLD NKPGREDRVA SEPEPHPVPD GSREPTKGTG GGGHSESESD KGSSETVAKK 240 RSREGKGGGD SAGEMRESSE AQSSASLTRK WNRKRRRRVE VPEQQRNNEE LLLVKSQPLV 300 GVLQMIRAHE HSSLFERRLP TQESDKYKSM VQQHVDLETI QSKLHKGAYS SCALSFYRDL 360 LLLFNNAVVF FPKSSLESLT AHQLRRLVLN EMKKNNLITR PPPNPSPSSE PSDSLPAAAV 420 HAPPPTTTPP CPPPPTQPPK RPDQLERSDS LLAKHKSTAP IIVCRKRSSI SSKPSAAASI 480 FDVKPKGEQQ QPKQQQQGDE KKKAAAFDVK TPINNNKASS KDDVAEEHKG GGAGAKAKDN 540 PVTTGTRSSR RTHHENNKKD GSGSIKKQTE TPKADKKSKT EAAALDKKRS AAADFLKRIK 600 RNAPAADTLK SGSGSGSGTS TRSGGGEQKR RGGGKVDKVK ERVLRQSGGD KKKQAKEESS 660 SPSKRSVGRP PKKAAAETAN VVASSKRPRE NGGKQEASRR PRKRSRR

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MIANFFTTWV ILRHSGYDDN MMILFGRNFT QKRRKLQDQT TTFTSSWGTW EELLLACAVK  60
RHGINDWDSV AMELQAKTSL PHLLTTAYNC KLNIPWLDDL RKLRVAQLRQ ELHRNDVSIV  120
SLQLKVKRLE EEREDSSKDD EAKPDLEEED SKGHRSENDK NIQDEPDRSK PDQENQSVNG  180
SNSTCSKSLD NKPGREDRVA SEPEPHPVPD GSREPTKGTG GGGHSESESD KGSSETVAKK  240
RSREGKGGGD SAGEMRESSE AQSSASLTRK WNRKRRRRVE VPEQQRNNEE LLLVKSQPLV  300
GVLQMIRAHE HSSLFERRLP TQESDKYKSM VQQHVDLETI QSKLHKGAYS SCALSFYRDL  360
LLLFNNAVVF FPKSSLESLT AHQLRRLVLN EMKKNNLITR PPPNPSPSSE PSDSLPAAAV  420
HAPPPTTTPP CPPPPTQPPK RPDQLERSDS LLAKHKSTAP IIVCRKRSSI SSKPSAAASI  480
FDVKPKGEQQ QPKQQQQGDE KKKAAAFDVK TPINNNKASS KDDVAEEHKG GGAGAKAKDN  540
PVTTGTRSSR RTHHENNKKD GSGSIKKQTE TPKADKKSKT EAAALDKKRS AAADFLKRIK  600
RNAPAADTLK SGSGSGSGTS TRSGGGEQKR RGGGKVDKVK ERVLRQSGGD KKKQAKEESS  660
SPSKRSVGRP PKKAAAETAN VVASSKRPRE NGGKQEASRR PRKRSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	277	RKRRR
2	274	279	KRRRRV
3	699	707	RRPRKRSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	9e-71	MYB_related family protein