PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g994030.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 25126.4 Da PI: 10.1986 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.2 | 3e-13 | 151 | 196 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq Pd.00g994030.m01 151 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 196 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MSSQQQGYSG LPPHYPRQSS FNGSYGLVGS AAMNHHTQPK AVHSNLVRQS SSPAGLFSNS 60 SVQNGFQFGT WNDSSNFAEN LGGMRRDQDN DGKLFSVPQN GELENRIHLL SHHLSLPKTS 120 AEIAMEKFLQ LQDSVPCKVR AKRGCATHPR SIAERVRRTR ISERMRKLQE LVPNMDKQTN 180 TADMLDLAVE YIKDLQKQFK TLSDVRANCK CLNMQKKPVS NQIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 5e-93 | bHLH family protein |