PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g993740.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 383aa    MW: 41641.2 Da    PI: 9.8853
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g993740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP137.92.9e-4379156178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +CqvegC++dls+ak y++rhkvC  hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+
  Pd.00g993740.m01  79 RCQVEGCQVDLSDAKAYYSRHKVCGLHSKTPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 156
                       6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MEMSSSSMTE SGSSSSSSPP NSFTESLNGL KFGQKIYFED ASLGASYKSG SAGSSSSSGA  60
TPPKKQRAGH LAHPGQPPRC QVEGCQVDLS DAKAYYSRHK VCGLHSKTPK VIVAGLEQRF  120
CQQCSRFHQL PEFDQGKRSC RRRLAGHNER RRKPQPGSVS ARFGRLSSSL FENSNKVGSF  180
LMDFTAYPRP ADRDAWAIAR TSERVPVNQN ANAMGKFLQH PWQSNSVTTS SRYLQGSAGG  240
TSYPDPGIPP RECVTGVADS SCALSLLSNQ PWGSRNRPSG VGMNAYLNTW MNTQGVTVTQ  300
PMAHAGTSNH FPTTSLGFKG NEAGSSSHEM LPDLGLGQIS QPLSRQYSGV LELSQQNRRQ  360
QHMELGHTRG YDSSTNQQMH WSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.16e-70SBP family protein