PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g993740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 383aa MW: 41641.2 Da PI: 9.8853 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 137.9 | 2.9e-43 | 79 | 156 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls+ak y++rhkvC hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ Pd.00g993740.m01 79 RCQVEGCQVDLSDAKAYYSRHKVCGLHSKTPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 156 6**************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MEMSSSSMTE SGSSSSSSPP NSFTESLNGL KFGQKIYFED ASLGASYKSG SAGSSSSSGA 60 TPPKKQRAGH LAHPGQPPRC QVEGCQVDLS DAKAYYSRHK VCGLHSKTPK VIVAGLEQRF 120 CQQCSRFHQL PEFDQGKRSC RRRLAGHNER RRKPQPGSVS ARFGRLSSSL FENSNKVGSF 180 LMDFTAYPRP ADRDAWAIAR TSERVPVNQN ANAMGKFLQH PWQSNSVTTS SRYLQGSAGG 240 TSYPDPGIPP RECVTGVADS SCALSLLSNQ PWGSRNRPSG VGMNAYLNTW MNTQGVTVTQ 300 PMAHAGTSNH FPTTSLGFKG NEAGSSSHEM LPDLGLGQIS QPLSRQYSGV LELSQQNRRQ 360 QHMELGHTRG YDSSTNQQMH WSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 6e-70 | SBP family protein |