PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g991780.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 230aa MW: 25306.8 Da PI: 9.6646 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 71.8 | 1.6e-22 | 11 | 96 | 1 | 88 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+ vGFs+r+sk +k+ + g+ +r fvCs egkre++k + + +++raetr gC a++k++ + ++k++vt+++ eH+H Pd.00g991780.m01 11 KFYNAYAYGVGFSIRRSKFHKE-KCGKLRDRLFVCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 96 6*****************9998.6677******************99.9999***********************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEFETEEEAF KFYNAYAYGV GFSIRRSKFH KEKCGKLRDR LFVCSAEGKR EKNKCDGSVK 60 SHRAETRFGC LARMKISCRL NDKYCVTEFV PEHTHVTSSP CKTHFFRSHR NMSLANAYIS 120 LQHFVKHIVH STSSDPMTLI GVGVGALPCS CWSRSFSSGI AAAVFKSISF SSPSQGLINS 180 NSNSTGTIAW LVTTETDDGG GGGYGRRDRV TKLVLLTASK LVGMGSCGRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-17 | FAR1 family protein |