PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g991190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 569aa MW: 61907.4 Da PI: 7.7883

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g991190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	1.9e-30	277	335	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + Cpv+k+v+r+a+d +++++tYeg+Hnh+ Pd.00g991190.m01 277 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPCPVRKQVQRCADDMSILITTYEGSHNHP 335 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK GGHGWLAEPE 60 QTNTLMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN ERLKLLLSRI VRNYQSLQIH 120 FHGRLQKDEE AKKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSTDQPR KDEQMKKTSH 180 FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVVMKN SSSDNSCGDP KEDDSTKLWP 240 PSKTSKTTRS GDDEVSQQTH LKKARVSVRA RCDAPTMNDG CQWRKYGQKI AKGNPCPRAY 300 YRCTVSPCPV RKQVQRCADD MSILITTYEG SHNHPLPMSA TAMASTTSAA ASMLQSYSST 360 SQQGHTAMAP ISASTNLQGL NFSKSTLSQN SRLPQHFYFP NSSISTTNSH PTVTLDHTAP 420 SPSHFGRFPA AVFSSNPRYP STCLNFSSSP SSSLDHNNHT LQLQAPWNNN HTAAGYLNYG 480 NRLMLTETIA SATKAITSNP KFQSALAAAL TSFVGTNNGG SATTGPKLLG RKRWRVDGVA 540 RCRLGTINSR GAAAESRGPM SNDDSTGAG

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK GGHGWLAEPE  60
QTNTLMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN ERLKLLLSRI VRNYQSLQIH  120
FHGRLQKDEE AKKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSTDQPR KDEQMKKTSH  180
FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVVMKN SSSDNSCGDP KEDDSTKLWP  240
PSKTSKTTRS GDDEVSQQTH LKKARVSVRA RCDAPTMNDG CQWRKYGQKI AKGNPCPRAY  300
YRCTVSPCPV RKQVQRCADD MSILITTYEG SHNHPLPMSA TAMASTTSAA ASMLQSYSST  360
SQQGHTAMAP ISASTNLQGL NFSKSTLSQN SRLPQHFYFP NSSISTTNSH PTVTLDHTAP  420
SPSHFGRFPA AVFSSNPRYP STCLNFSSSP SSSLDHNNHT LQLQAPWNNN HTAAGYLNYG  480
NRLMLTETIA SATKAITSNP KFQSALAAAL TSFVGTNNGG SATTGPKLLG RKRWRVDGVA  540
RCRLGTINSR GAAAESRGPM SNDDSTGAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-71	WRKY family protein