PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g990660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 334aa MW: 36066.2 Da PI: 9.872 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.8 | 1.2e-13 | 94 | 138 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky Pd.00g990660.m01 94 AWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 138 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MSRTCSQCGN NGHNSRTCTE ASGGGGGAAS AENGIMLFGV RVTEGNEFRK SASMNNLSQY 60 EQNIQADSNG DAGYASDDVV HASGHRRERK RGVAWTEEEH RLFLLGLQKV GKGDWRGISR 120 NFVKTRTPTQ VASHAQKYFL RRNNHNRRRR RSSLFDITTD TPLMNSLMDE DIGQQKHQET 180 ATALPYPQQP QPQMNLGRHI LGGFPVSTFP MALSPGVLPV SGETSSVDNL TSSIGPNLNL 240 QNEVPQQAKG APTTLSAKLI RPIPLHPVPP PPSSKMAGLN LNNKYTPPPT RDPLPLSLKL 300 ATTSSEEQSP NTASSHSSAF QGMSSGSDSI ISVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 6e-72 | MYB_related family protein |