PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g989750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 227aa MW: 25816.1 Da PI: 6.9846

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g989750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.9	5.3e-14	9	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 +g WT+eEd l+d+v+ +G+g+W++I++ g R +k+c++rw +yl Pd.00g989750.m01 9 KGLWTKEEDRVLLDYVTVHGSGRWNRIPKLTGktlstfctCLRNGKSCRLRWINYL 64 678***********************************66**********97 PP
2	Myb_DNA-binding	55.7	1.1e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w++ Pd.00g989750.m01 70 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNYWNT 113 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MEAENEYKKG LWTKEEDRVL LDYVTVHGSG RWNRIPKLTG KTLSTFCTCL RNGKSCRLRW 60 INYLSPNVKR GDFSEEEEDL IIRLHNLLGN RWSLIAGRVP GRTDNQVKNY WNTRLCKKLG 120 FKKQTPKALA SSSETPKGPD SNSKQSCSCG TSSTVKDMEA LQNNQNPLLD DIVAAEDSNS 180 NEEIQWMTEH CAESLSCSNG HNLISWGMLE FLQGHPLELL YQNFELS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-61	MYB family protein