PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g981650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 583aa MW: 66589.3 Da PI: 8.1564

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g981650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.3e-14	5	51	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 +WT+eEd+ll ++++q+G g W++++ gRt++++k++w+ + Pd.00g981650.m01 5 PWTKEEDQLLRKCIEQYGEGKWHRVPLLAArlPGRTGNDVKNYWNCH 51 7********************9976666666*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE 60 AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL AQEGGSSSRT 120 QIPTPMPMPM LCNIGDGQNQ MFQAEHDESN KNVPSVEEED INDGINMACL YKFGVSARFI 180 MAYIPPHKRH SKETERPLPT PELLAPQFKK KLDLRSSKSN ADLDGKVIYA NHARSRWCII 240 GLDDENQFPS SVNLEPISWE TTERRIGEKP LALINTSLDK GSEVKWYFPK SPWVSIAENV 300 LEDLLSSFEN VKNDMKCPKL EQVKPSLVAR VGKVLFQRSP SVNMESIRNN LDTEILKQWK 360 RLFYTNLPVS YKENILKKVV PNIGVDFEEE KDVYQVKLSD STRPDSILSC KCSVMKEHGK 420 LQLHKIELNQ LRDMVIDISC PNKNLDLRVM LSTKRPVTAL SDDEMQSIRD LISSAVLDPD 480 VKGGLRWPLG KESSGDRYKV VGIWHVIANM YTNPSLRLKV RHADRFDFRT STGEATWEVS 540 LMLKKVLSKL QEEKVEVSSI SEILEENMRM IWDNFLCSEH FLI

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MGGIPWTKEE DQLLRKCIEQ YGEGKWHRVP LLAARLPGRT GNDVKNYWNC HLSKKLNAQE  60
AEDKNKHCAR NVQVMRPRAS NYASTNSKRP YSTALDQAPS NNFCQPVNLL AQEGGSSSRT  120
QIPTPMPMPM LCNIGDGQNQ MFQAEHDESN KNVPSVEEED INDGINMACL YKFGVSARFI  180
MAYIPPHKRH SKETERPLPT PELLAPQFKK KLDLRSSKSN ADLDGKVIYA NHARSRWCII  240
GLDDENQFPS SVNLEPISWE TTERRIGEKP LALINTSLDK GSEVKWYFPK SPWVSIAENV  300
LEDLLSSFEN VKNDMKCPKL EQVKPSLVAR VGKVLFQRSP SVNMESIRNN LDTEILKQWK  360
RLFYTNLPVS YKENILKKVV PNIGVDFEEE KDVYQVKLSD STRPDSILSC KCSVMKEHGK  420
LQLHKIELNQ LRDMVIDISC PNKNLDLRVM LSTKRPVTAL SDDEMQSIRD LISSAVLDPD  480
VKGGLRWPLG KESSGDRYKV VGIWHVIANM YTNPSLRLKV RHADRFDFRT STGEATWEVS  540
LMLKKVLSKL QEEKVEVSSI SEILEENMRM IWDNFLCSEH FLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-17	MYB family protein