PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g981520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 216aa MW: 24522.9 Da PI: 9.5933 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 74.3 | 1.3e-23 | 83 | 163 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eks+ lltq+f+kl+ +s e++++l++v+k L+ + +++k+RRiYDi+NVL+++nliek ++k +++w g Pd.00g981520.m01 83 RREKSMALLTQNFVKLFVCSIEEMISLDDVTKLLLGDvqsapAMRTKVRRIYDIANVLSSMNLIEKthtadTRKLAFKWLG 163 689***************************************************************999999999999987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MAYLFLHQPK NQYYWKGFGA IRNALQELRE EGLRENCINF VANDNAKVSD DKDDEERCGS 60 QLNDKSNPTV NPQPPADQKT DNRREKSMAL LTQNFVKLFV CSIEEMISLD DVTKLLLGDV 120 QSAPAMRTKV RRIYDIANVL SSMNLIEKTH TADTRKLAFK WLGLRGKEEN LVPSESRKRA 180 LGTYITNVIS KRGKMESSIG GKLDAQKQRQ PTQISS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48160.1 | 9e-62 | E2F/DP family protein |