PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g981020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23666.2 Da PI: 4.8969 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.2e-20 | 75 | 124 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f+taeeAa a+++a+ +++g Pd.00g981020.m01 75 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAFAMRG 124 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MFKFVDHHHH SQPLPQLPFN ENDSEEMLLY GVLAEAPAGG DHNNSSESIT HSNKDIHEEV 60 NSSNSTPEED QAISYRGVRR RPWGKFAAEI RDSTRNGVRV WLGTFDTAEE AALAYDQAAF 120 AMRGSLAVLN FPADVVYQSL VEMKYGFDEG SSPVLALKRR HTLKRKSSMN KKKKLSDHQK 180 NDENDDEDQL VLEDLGADYL EELLTISAMT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 158 | 174 | KRRHTLKRKSSMNKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 6e-49 | ERF family protein |