PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g979340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 564aa MW: 62028.7 Da PI: 7.0356

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g979340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.3	1.5e-33	253	310	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg+nWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k Pd.00g979340.m01 253 DDGFNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGNHNHPK 310 8**************************************.*************85 PP
2	WRKY	105.6	2.6e-33	424	482	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ Pd.00g979340.m01 424 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 482 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MASSSGSLDT SANSHPTFTF STHPFMTTSF SDLLASGTDE DPSTNTTARH VGHGGLADRI 60 AERTGSGVPK FKSLPPPSLP ISPPSVSPSS YFAIPAGLSP AELLDSPVLL STSNILPSPT 120 TGSFAAQAFW KANSGNNQQI VKQEIKNYSD FSFQTQTRPF TSSSTMFQSS NGTIQTAQEQ 180 GWSNSYFQAQ EPQKKDDFSS GKSMVKPEYG SVQSFSSGMA TNIQNNSQAN GGFQSEYSNY 240 NHQQSQTLSR KSDDGFNWRK YGQKQVKGSE NPRSYYKCTY PNCPTKKKVE RSLDGQITEI 300 VYKGNHNHPK PQNTRRSSSN SSHAIQASNP NTNEIPDQSF ANHGNSQMDS IGTPENSSIS 360 MGDDDFEQSS QKSKSGGGDE FDEDEPNAKR WKKEVDNEGI SAPGSRTVRE PRVVVQTTSD 420 IDILDDGYRW RKYGQKVVKG NPNPRSYYKC TNPGCPVRKH VERASHDLRA VITTYEGKHN 480 HDVPAAPTAM RPVAHQTNNL RQQTSEGQQA PFTLEMLQSP GSFGFAGFDN SMGSYMNQAQ 540 LNENMFSKTK EEPRDDVFFE SLLC

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MASSSGSLDT SANSHPTFTF STHPFMTTSF SDLLASGTDE DPSTNTTARH VGHGGLADRI  60
AERTGSGVPK FKSLPPPSLP ISPPSVSPSS YFAIPAGLSP AELLDSPVLL STSNILPSPT  120
TGSFAAQAFW KANSGNNQQI VKQEIKNYSD FSFQTQTRPF TSSSTMFQSS NGTIQTAQEQ  180
GWSNSYFQAQ EPQKKDDFSS GKSMVKPEYG SVQSFSSGMA TNIQNNSQAN GGFQSEYSNY  240
NHQQSQTLSR KSDDGFNWRK YGQKQVKGSE NPRSYYKCTY PNCPTKKKVE RSLDGQITEI  300
VYKGNHNHPK PQNTRRSSSN SSHAIQASNP NTNEIPDQSF ANHGNSQMDS IGTPENSSIS  360
MGDDDFEQSS QKSKSGGGDE FDEDEPNAKR WKKEVDNEGI SAPGSRTVRE PRVVVQTTSD  420
IDILDDGYRW RKYGQKVVKG NPNPRSYYKC TNPGCPVRKH VERASHDLRA VITTYEGKHN  480
HDVPAAPTAM RPVAHQTNNL RQQTSEGQQA PFTLEMLQSP GSFGFAGFDN SMGSYMNQAQ  540
LNENMFSKTK EEPRDDVFFE SLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-112	WRKY family protein