PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g977710.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 26133.9 Da PI: 5.8668 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.1 | 1.4e-07 | 62 | 108 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+ + + Lr+llP+ + ++K s +e +Av+YI ++ Pd.00g977710.m01 62 RDNERQRRQLMAVLNASLRSLLPHeL---IKGKRSISEHMNEAVNYITQM 108 679*********************88...******************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MMQIEDLVPG HEVLPEGSDP SHNNKKMGKG KQQQQHMILF AHPDNNEANP SDVKVERKIV 60 RRDNERQRRQ LMAVLNASLR SLLPHELIKG KRSISEHMNE AVNYITQMKR KIQELNAKKE 120 KLIRLYEYDS SAQESGLENE TSGHDLVNSV TNIMVGPTCL GGVEVVISSS CSEDEGLPLS 180 RVLKLLLAEG LCVVECASTR VNERVFHTIQ CEVDDLECVD LSELQLKLNL QI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 3e-40 | bHLH family protein |