PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g977560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 558aa MW: 59806.1 Da PI: 7.3163

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g977560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.8	9.7e-35	85	155	3	73
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai ++tgt++ +a ++ Pd.00g977560.m01 85 AAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIMQATGTGTVPAIAV 155 5799***********************************************************77777443 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MEPNQRQSLE ESNELEQHSD SSSNDNTTSA SDPSVADPPE KIFPLTAPTM KEELTDTVQE 60 LDEGSLPMGL IQVPVPTSSE KQVVAAKRSS KDRHTKVEGR GRRIRMPATC AARIFQLTRE 120 LGHKSDGETI RWLLEHAEPA IMQATGTGTV PAIAVSVGGT LKIPTTSPAR PNGEITEIPR 180 KRRKRGSNSE FVDVHEQSSV SSGLAPMSYG GGGDGGGAHG LVPMWQVGAT GAAGPFFMFP 240 NNGAMNPNQP QLWAVPAADA ATPIFNFQAR PISNFLSAFQ PGVHVVGGDV QLQASSGSIS 300 SGATSADMMS SNMHSLKWVL LDLIDRCSGF SCFKQIHAQI VTSGLACNDL VANNVVGFLG 360 KNVNSVDYAC DFLKQVDWRV SSFPFNKLIS GYANGDKPGA AVLVYRRIVR DGFVPDLYTV 420 PAVLKSCVKF LGKGEGRQVH GVVVKMGFQC DVYAQNSLVH FYSVCGDCGG AIRVFDEMPV 480 KDVVSWTGLI SGHVKAGLFD EAISLFFRMD VKPNVATFVS VLVACGRMGY LRVGKGIHGL 540 IFKRSLGTNL VNLVCEDA

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MEPNQRQSLE ESNELEQHSD SSSNDNTTSA SDPSVADPPE KIFPLTAPTM KEELTDTVQE  60
LDEGSLPMGL IQVPVPTSSE KQVVAAKRSS KDRHTKVEGR GRRIRMPATC AARIFQLTRE  120
LGHKSDGETI RWLLEHAEPA IMQATGTGTV PAIAVSVGGT LKIPTTSPAR PNGEITEIPR  180
KRRKRGSNSE FVDVHEQSSV SSGLAPMSYG GGGDGGGAHG LVPMWQVGAT GAAGPFFMFP  240
NNGAMNPNQP QLWAVPAADA ATPIFNFQAR PISNFLSAFQ PGVHVVGGDV QLQASSGSIS  300
SGATSADMMS SNMHSLKWVL LDLIDRCSGF SCFKQIHAQI VTSGLACNDL VANNVVGFLG  360
KNVNSVDYAC DFLKQVDWRV SSFPFNKLIS GYANGDKPGA AVLVYRRIVR DGFVPDLYTV  420
PAVLKSCVKF LGKGEGRQVH GVVVKMGFQC DVYAQNSLVH FYSVCGDCGG AIRVFDEMPV  480
KDVVSWTGLI SGHVKAGLFD EAISLFFRMD VKPNVATFVS VLVACGRMGY LRVGKGIHGL  540
IFKRSLGTNL VNLVCEDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-59	TCP family protein