PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g977400.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 702aa MW: 76340.1 Da PI: 4.6913 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78 | 1.2e-24 | 210 | 263 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+++Wt+ LH++F+ a++++ G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ Pd.00g977400.m01 210 KPKVVWTNSLHNQFLLAIKHI-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRI 263 79*******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 27.3 | 8.4e-09 | 213 | 262 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ +++ a+k G + +k+I + m+ g+t++++ s++qky+ Pd.00g977400.m01 213 VVWTNSLHNQFLLAIKHIGLDkaVPKRILEFMNvPGLTRENVASHLQKYR 262 68***********************************************7 PP | |||||||
3 | Response_reg | 76.5 | 9.9e-26 | 27 | 135 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 +l+vdD+ + + ++ +l+ y +v +++++ +al++l++++ +Dl+++D+ mp+m+G+el k+ +ee klp+i+++a ++e+ +l+ l+ Pd.00g977400.m01 27 ILVVDDDATTLAIVSAMLKTWSY-QVVSVRNPIDALATLRARKgiFDLVVTDLHMPQMNGFELQKHVHEEF-KLPVIMMSADDKESVILKSLE 117 89*********************.9999***********99999*************************99.********************* PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 G+ +++Kp++++++ + Pd.00g977400.m01 118 GGVVYYIVKPVSKDDIKN 135 **************9976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 702 aa Download sequence |
MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA 60 LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV 120 VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK 180 QEKKAEAKVK KERKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIKHI GLDKAVPKRI 240 LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFALG HPALVFNNVQ 300 RDQYYSQLLN PQQMGTSIAS TFQPSAGNGN TLALTAAASN NLGSIQFPNY HQSSSSNSSR 360 SFPQLIGSGQ LPLLSNNQAN ILCQQPMLGN GNGDQLLCQA NSRTAAFGVQ QLMNTFGNGG 420 NQISSSYTPL SSSFENMGST VNNVNQRVPN SSHQLVTNFA GSQIMSSSGR ELVGLMGSQP 480 AGMLNNITNI NIGGGYPNVS LTGAPIGNNN GIFNSGYMAQ LGASSSSMSS SAGFEISASS 540 AYQFPPSLLK NNGDDQQQNV PVLPPSAGNI NDQCGLANMN VGGGNVENSH SGVMDNTITT 600 DAPPTLINNN NISHEQELVG DIDDLMLSNL FMDQQNYEPS PPPFQQQDGD QDQLPPDFAS 660 FLYQVEVPDP SADQVPNLDS YHVEDNADCD DDFLNAILDS DM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 6e-57 | ARR-B family protein |