PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g977040.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 299aa MW: 33730.6 Da PI: 7.7198

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g977040.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	9.5e-16	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l +++ ++G g+W++++ g+ R +k+c++rw +yl Pd.00g977040.m01 17 KGLWSPEEDQRLRNYILKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 64 678*******************************************97 PP
2	Myb_DNA-binding	55	1.9e-17	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E+e ++ ++++lG++ W+ Ia++++ gRt++++k++w++yl Pd.00g977040.m01 70 RGTFSKQEEETILTLHHMLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 115 899*****************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MGCKSSDKPK PKPKHRKGLW SPEEDQRLRN YILKHGHGCW SSVPINAGLQ RNGKSCRLRW 60 INYLRPGLKR GTFSKQEEET ILTLHHMLGN KWSQIAQHLP GRTDNEIKNY WHSYLKKKVA 120 KAEEIMEGQS KSQYTSTTSS SDNLECSPSP HKPTTCINPS YESVEKSPTL IPQTGDQTHR 180 SPLPKILFAE WLSLDHVHGG SYANNIGEAG VSREGFDHSS NNLQADHALG HDFLLNNEGT 240 FENGFHYGLS HHGAATEMIN SSQFKFEDQI SGPGFVDFIS GGDMCSDFNL HNDVMYFYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	2e-61	MYB family protein