PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g973690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 387aa MW: 42811.8 Da PI: 7.7536 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 98.3 | 1.4e-30 | 59 | 186 | 3 | 121 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa......sec.eaesssssasnsssg 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLl + i++l+ ++ ++ +++ ++++s+ ++++s+++ Pd.00g973690.m01 59 GGKDRHSKVSTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDVTEDDIDKLPPLQVPHGfahqfhQQMlNPHHSHDQGHQSNNS 151 78*************************************************************555553332322225445555554444444 PP TCP 89 ..kaaksaakskksqksaasalnlakesrakarar 121 +a ++ +s++ ++++++++ +++++r++ + Pd.00g973690.m01 152 laAAPFFDVNSSFMEADHQAHQVVHDHQRSSTTTN 186 65555556677777777777777777766444333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MISNSREKGF QAKQEGHNNT NNDGNSSNFN KASSSSTTTS RQWSGFRNPR IVRVSRTFGG 60 KDRHSKVSTV RGLRDRRIRL SVPTAIQLYD LQDRLGLSQP SKVIDWLLDV TEDDIDKLPP 120 LQVPHGFAHQ FHQQMLNPHH SHDQGHQSNN SLAAAPFFDV NSSFMEADHQ AHQVVHDHQR 180 SSTTTNVGDR KGKSIKTHDE QDDDDQNHHQ DGNIGGGQLL AQKLFPLGNH PSSIPGLLNN 240 AMAYNYYHNY SEPSSLSLSQ FGGHGFPPVP QIDHHSHMMG NALSFSSSMP SGSQLFFCPS 300 TATPSLFGPY PPYITNPGVE RGTNTSEPRS QANHFQFLSS SNSPNLLPNA LMSSLQSLKS 360 YPTSVNPKQL HSNSQDNNGS QPNKDHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60970.1 | 9e-49 | TCP family protein |