PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g972610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 472aa MW: 53680.4 Da PI: 6.9165 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 94.1 | 1.3e-29 | 126 | 211 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea Pd.00g972610.m01 126 RWPRQETLTLLEIRSRLDFKFKEANQKGPLWDEVSRIMcEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKNYRFFRQLEA 211 8***********************************998*******************************97..66678*******85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MEDQYNMSDL RQLMNGGGNR AHFPSIPLQA ATELFPSHRV PPLTAPPAHH HQQHHHYEQL 60 MMMGRPQPHD HHIINPRGLH HHEFRSPDSA AGGGAAANSA TVTASLSGGG GLMEAEAGGD 120 IGGSGRWPRQ ETLTLLEIRS RLDFKFKEAN QKGPLWDEVS RIMCEEHGYQ RSGKKCREKF 180 ENLYKYYKKT KEGKAGRQDG KNYRFFRQLE ALYGETTNSV VSTSLPEAHF IGNNSNNNNL 240 RYQTTINAQA NQEITTPYHH STDQKHCDSL SLSNSSEFDT SSSEDQDNND VSAAAMDDDS 300 PDIKTMRKRR GGRGWKVKIK EFIDAQMRKL MEKQEEWLER LMRTLEQKER ERMVREEEWR 360 KQEVERVEKE HKFWAKERAW IEARDKALME ALHKLTGGSS STDQAKANYR GYCAEMNDHE 420 QGGNNDGSNN SPCGNANVGN AVQDNCFPFL MSEGENLWEN YGLKLSKGSQ NQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10000.1 | 4e-75 | Trihelix family protein |