PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g972420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 292aa MW: 31998.9 Da PI: 4.7013 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.3e-05 | 265 | 288 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C+ C++sF++ L++H + H Pd.00g972420.m01 265 FNCQSCNRSFNSDGALQSHTKAkH 288 78*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MEFWGVEVKS GQSVSVEPKN KVVHLSQVCL DDVKKAKGSN PISLFVKTGN HKLVLGILSA 60 EKFPQLPLDI FFGEKFELSH NWKNGSVHFI GYKSLSKYPF CDNSDSEEDV ALTVVDNGKP 120 KVSTEDAKKA IKSEQKETSS DDDESDDEEV GADQTKVKIE EGSSEDEDES DDDDDDDADS 180 EDETDDSEEE DEETTKKAEV SKKRPAESTK RLANNKKAKF VTPEKTDSKK GSVHIATPYP 240 AKQAGKKPAT SDQSKQQAPK SGGTFNCQSC NRSFNSDGAL QSHTKAKHSA AK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 3e-28 | C2H2 family protein |