PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g971200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 754aa MW: 89915.5 Da PI: 7.8663

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g971200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	52.5	8e-17	680	726	23	71
E2F_TDP 23 givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +++++ e+a+ +++k ++RRiYDi+NVLe+++liekk kn+i+wkg Pd.00g971200.m01 680 QNLKILEAAHMW--KKQKVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 726 566666666666..56677****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
MASFKDADPT PGFLTRKDAD VMLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK 60 QKITDPTELA DYRLRKRKEF EDQIRRVKGN VGDWIKYAQW EESHKDFERA RSVWERALEV 120 DHRNPTLWCN YAEAEMKNKF INHARNVWDR AITLLPRVDK IWYKYIHMEE IIGNVAGARQ 180 IYERWMNWMP DQQGWLSFIK FELRYNEVER ARAIFERFVQ CHPKVGAWIR YAKFEMKNGE 240 VARARNVYER AVEIVGDDEE AEQLFVAFAE FEERCKETDR ARRIYKFALD HIPKERVEDL 300 YKKFVGLEKQ HGDRQGIEDA IVGKRRFQYE DEVRKNPLNY DSWFDYIRLE ESAGNKDRIR 360 EVYERAIANV PPVPEKRYWQ RYIYLWINYA LYEELDAGDM ERARDVYREC LQLIPHKKFS 420 FAKIWLLAAT FEIRQLNLEG ARKILGTAIG KSPKGKIFKK YIEIELNLGN FDRCRKLYGK 480 YLHWSPENCY AWTKYAELEK SLCETERTRA VFELAIAQPA LDMPELLWKA YIDFELSEGE 540 FERTRELYER LLDRTKHLKV WISYAKFEAS AIVEAMCSED QDQDYLREQT KQCVQRVRRI 600 FEKAFNYFRT SAPELKEERC LLLEEMLNAE ASFGDLGDVS LVQSKLPKKL KKRRPIPTED 660 GPAGYEEYID YCFPEEEHTQ NLKILEAAHM WKKQKVQKRR IYDITNVLEG IGLIEKKLKN 720 RIQWKGLDVS RTGDVDGNYP SLQAQFENLS DEER

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

MASFKDADPT PGFLTRKDAD VMLPRPTRVK NKTPAPVQIT AEQILREARE RQEAEIRPPK  60
QKITDPTELA DYRLRKRKEF EDQIRRVKGN VGDWIKYAQW EESHKDFERA RSVWERALEV  120
DHRNPTLWCN YAEAEMKNKF INHARNVWDR AITLLPRVDK IWYKYIHMEE IIGNVAGARQ  180
IYERWMNWMP DQQGWLSFIK FELRYNEVER ARAIFERFVQ CHPKVGAWIR YAKFEMKNGE  240
VARARNVYER AVEIVGDDEE AEQLFVAFAE FEERCKETDR ARRIYKFALD HIPKERVEDL  300
YKKFVGLEKQ HGDRQGIEDA IVGKRRFQYE DEVRKNPLNY DSWFDYIRLE ESAGNKDRIR  360
EVYERAIANV PPVPEKRYWQ RYIYLWINYA LYEELDAGDM ERARDVYREC LQLIPHKKFS  420
FAKIWLLAAT FEIRQLNLEG ARKILGTAIG KSPKGKIFKK YIEIELNLGN FDRCRKLYGK  480
YLHWSPENCY AWTKYAELEK SLCETERTRA VFELAIAQPA LDMPELLWKA YIDFELSEGE  540
FERTRELYER LLDRTKHLKV WISYAKFEAS AIVEAMCSED QDQDYLREQT KQCVQRVRRI  600
FEKAFNYFRT SAPELKEERC LLLEEMLNAE ASFGDLGDVS LVQSKLPKKL KKRRPIPTED  660
GPAGYEEYID YCFPEEEHTQ NLKILEAAHM WKKQKVQKRR IYDITNVLEG IGLIEKKLKN  720
RIQWKGLDVS RTGDVDGNYP SLQAQFENLS DEER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	2e-18	E2F/DP family protein