PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g970630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 484aa MW: 55251.5 Da PI: 8.0524

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g970630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.4	7.6e-26	319	407	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k r++ra+tr gCka+++vk +k++kw++tk+ ++HnH+l+ Pd.00g970630.m01 319 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSSKWVITKFIKDHNHPLV 407 9************************************99999998**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MAKTGDVMKK IGEASQWIAS KIKDFLQYVS NKATELLNVA RRFFDNFSEE FKEALVKSKC 60 VIDDTIAKAT DLMSKWTDAA CNSIVQLKNL VASMLKLMLD LYRSGLKRFL SLMQELPIPL 120 KHPFLSLILL LFHLFWEAQA KEAYASLILL GWPKTPLNCA LEATGQEGCL DQVAFRSSQS 180 CRSSSEGRIL TPHTLPANAT HRVGIGAFVI NPNREVLIDS EFVEILAFRE DGCNVKGYFA 240 WSLLDNWEWA AIAFTSQRNF HSRPENEDLL SLLESMDSDE GARAVESSSS QALVLYEADS 300 ILEPYEGMEF ESEDAAKIFY DEYARRVGFV MRVMSCRRSE RDGRILARRL GCNKEGHCVS 360 IRGKFGPVRK PRASTREGCK AMIHVKYDKS SKWVITKFIK DHNHPLVVSP REARQTMDEK 420 DKKIQELTAE LRNKKRLCTT YQEQLTAFTK IVEEYSDQLS KKVQNVVSNL KEFESIDREL 480 LQHR

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MAKTGDVMKK IGEASQWIAS KIKDFLQYVS NKATELLNVA RRFFDNFSEE FKEALVKSKC  60
VIDDTIAKAT DLMSKWTDAA CNSIVQLKNL VASMLKLMLD LYRSGLKRFL SLMQELPIPL  120
KHPFLSLILL LFHLFWEAQA KEAYASLILL GWPKTPLNCA LEATGQEGCL DQVAFRSSQS  180
CRSSSEGRIL TPHTLPANAT HRVGIGAFVI NPNREVLIDS EFVEILAFRE DGCNVKGYFA  240
WSLLDNWEWA AIAFTSQRNF HSRPENEDLL SLLESMDSDE GARAVESSSS QALVLYEADS  300
ILEPYEGMEF ESEDAAKIFY DEYARRVGFV MRVMSCRRSE RDGRILARRL GCNKEGHCVS  360
IRGKFGPVRK PRASTREGCK AMIHVKYDKS SKWVITKFIK DHNHPLVVSP REARQTMDEK  420
DKKIQELTAE LRNKKRLCTT YQEQLTAFTK IVEEYSDQLS KKVQNVVSNL KEFESIDREL  480
LQHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-108	FAR1 family protein