PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g968850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 502aa MW: 55039.2 Da PI: 7.1318

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g968850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.3	8.6e-30	212	271	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ ed +++++tYeg+Hnh+ Pd.00g968850.m01 212 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHP 271 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MPNSNSRTAP EKKVDESVGY QEIYSQEESE LENARAEMGE VREENARLKL ALQHMEKDYQ 60 SLQCRFFDIL RQEASKKATN VDVGVHRIEE PNQLLYLCLG RSPREPKNDE TNTTNFTKLV 120 QVDHEDLNAN LTLGLGNSKL MELPMELVRS QKPQETSLEE PKDHSEAGAG ESLPPSSKTP 180 KTTRNEDDEV PQQANAKRAR VSVRVRCDTP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV 240 APACPVRKQV QRCYEDMSIL ITTYEGTHNH PLPFTASSMA STTAAAASML LSGSSTSQPG 300 FGSTATLLNG SDFGVFDSSR TNQLYLPKSS NPLLPTITLD LTASPSSSPI HLNRLSSSFA 360 SACTFPSSLS FCSSESNISP NSRGNGYLKY GSLPFDKGSF NLDQPYAEKN HQSSSQVSLT 420 ESLTKAITSD PNFKSVIAVA LSSMVGGGAA THRNQGEGER LGHHLKWSEA AHQFTSHNPL 480 IQNGKGCSTP SIFNRQSSDS QK

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MPNSNSRTAP EKKVDESVGY QEIYSQEESE LENARAEMGE VREENARLKL ALQHMEKDYQ  60
SLQCRFFDIL RQEASKKATN VDVGVHRIEE PNQLLYLCLG RSPREPKNDE TNTTNFTKLV  120
QVDHEDLNAN LTLGLGNSKL MELPMELVRS QKPQETSLEE PKDHSEAGAG ESLPPSSKTP  180
KTTRNEDDEV PQQANAKRAR VSVRVRCDTP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV  240
APACPVRKQV QRCYEDMSIL ITTYEGTHNH PLPFTASSMA STTAAAASML LSGSSTSQPG  300
FGSTATLLNG SDFGVFDSSR TNQLYLPKSS NPLLPTITLD LTASPSSSPI HLNRLSSSFA  360
SACTFPSSLS FCSSESNISP NSRGNGYLKY GSLPFDKGSF NLDQPYAEKN HQSSSQVSLT  420
ESLTKAITSD PNFKSVIAVA LSSMVGGGAA THRNQGEGER LGHHLKWSEA AHQFTSHNPL  480
IQNGKGCSTP SIFNRQSSDS QK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-89	WRKY family protein