PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g968560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 218aa MW: 23694.2 Da PI: 9.2177 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 44.7 | 3.1e-14 | 1 | 32 | 29 | 59 |
ZF-HD_dimer 29 mpsegee.gtaaalkCaACgCHRnFHRrevee 59 mps+++ +++++lkCaACgCHRnFHRr++e+ Pd.00g968560.m01 1 MPSPTAIpTDPTSLKCAACGCHRNFHRRDPED 32 6777777799******************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MPSPTAIPTD PTSLKCAACG CHRNFHRRDP EDPMPPSTAA TTHVIEYQPH HRHHPPPPTH 60 GGNRSPNSAS PPPISSSYYP SAPHMLLALS TAHENALGGP NNHHSPQPPI VSPSSNARKR 120 FRTKFSQEQK DKMYQFAERV GWKMQKRDEE IVQEFCNEIN VDKGVLKVWM HNNKNTFAKR 180 DVINGSGGGL SGGNLNHYQG TDGGAAGHVG TNGSSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 4e-43 | ZF-HD family protein |