PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g968100.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 350aa MW: 39322.3 Da PI: 4.711 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.5e-19 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g Pd.00g968100.m01 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94 789******.7*********33....35**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MGRKRKVSDG MEDRSSSEGT MAWDEMVKEA SAAAELGGAR RARKRFVGVR QRPSGRWVAE 60 IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSHSPSS TPALPSKITN 120 LLLQRLKARN NRNSCSAPSA PLPINHHQMQ QHADHQEEEA GADFSETQYT DFLNDPEDYI 180 TSNNHDIISA SSIDYMTSSF ESCLTEKEEY STAREIDQMD YGNLSEVAQT YSGGDANFFV 240 DDIGASNYYS PSPFEIAEEM EEPVEPETYA DEPSMLRAAM KRMKYERKFS ASLYAFNGIP 300 ECLKLKIGSS SSSGNAKGRG ISESLSNLQR AYQKEEDVRR EDITWTDEER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 3e-23 | ERF family protein |