PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g967140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 376aa MW: 41398.5 Da PI: 7.0687

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g967140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102.4	7.9e-32	55	196	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLq++LG+ ++sk ++WLl +ak++i+el+ ++ +++ ++ +++s + ++s ++ + Pd.00g967140.m01 55 FGGKDRHSKVCTVKGLRDRRVRLSVPTAIQLYDLQERLGLNQPSKVVDWLLDAAKHEIDELPPLPLPPSGNFglNHSSLVLTSS-HGVQthah 146 689*************************************************************99999555533333333333.22222322 PP TCP 89 .......................kaaksaakskksqksaasalnlakesr.......akarararertrekmrik 133 + k+++ ar+ t+e+ + Pd.00g967140.m01 147 aqlshdngegpsggiaparshfwS-------------------------TnsdaiwrGKSKEIARDTTNEEEEEN 196 223222222222222222222220.........................02222333444444444444433333 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MIKSPNEADL QEAAGNSSRD DQANKFSTKA NDLSRPSTPW LRLKDPRIVR VSRAFGGKDR 60 HSKVCTVKGL RDRRVRLSVP TAIQLYDLQE RLGLNQPSKV VDWLLDAAKH EIDELPPLPL 120 PPSGNFGLNH SSLVLTSSHG VQTHAHAQLS HDNGEGPSGG IAPARSHFWS TNSDAIWRGK 180 SKEIARDTTN EEEEENQKDI STGSDQKEEG TVDGNSSSNN FLTRISTNHP FFPGLVNNAM 240 PYAYHNWDHN QPSNFPLSQL ASHGFPSQTA DLHNFINVVS LPSTLSLSTT QSYFPSHNAA 300 AAAEVDPRQF NHMHMLSSSS TSQNLLPNSL SPTLYPNSQT LRAPHLSMMT KLVRSSNNTT 360 GSDHHQPNTD QESPSR

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MIKSPNEADL QEAAGNSSRD DQANKFSTKA NDLSRPSTPW LRLKDPRIVR VSRAFGGKDR  60
HSKVCTVKGL RDRRVRLSVP TAIQLYDLQE RLGLNQPSKV VDWLLDAAKH EIDELPPLPL  120
PPSGNFGLNH SSLVLTSSHG VQTHAHAQLS HDNGEGPSGG IAPARSHFWS TNSDAIWRGK  180
SKEIARDTTN EEEEENQKDI STGSDQKEEG TVDGNSSSNN FLTRISTNHP FFPGLVNNAM  240
PYAYHNWDHN QPSNFPLSQL ASHGFPSQTA DLHNFINVVS LPSTLSLSTT QSYFPSHNAA  300
AAAEVDPRQF NHMHMLSSSS TSQNLLPNSL SPTLYPNSQT LRAPHLSMMT KLVRSSNNTT  360
GSDHHQPNTD QESPSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	4e-43	TCP family protein