PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g966800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 90aa    MW: 10316.9 Da    PI: 8.505
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g966800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.4e-191663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ll ++v+++G g+W+ +a + g++R++k+c++rw +yl
  Pd.00g966800.m01 16 KGPWTPEEDKLLNEYVNLHGEGRWSCVATCAGLNRSGKSCRLRWVNYL 63
                      79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MVAMMGWGVA EQEWRKGPWT PEEDKLLNEY VNLHGEGRWS CVATCAGLNR SGKSCRLRWV  60
NYLRPGLKRG HITPQEEGII IELHALWGNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.16e-45MYB family protein