PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g966620.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 991aa    MW: 111307 Da    PI: 7.4733
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g966620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.73.7e-17704753255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r +h+e E+rRR++iN++f+ Lr+l+Pk+    ++K +Ka+ L +++eYI+ Lq
  Pd.00g966620.m01 704 RSKHSETEQRRRSKINERFQMLRDLIPKN----DQKRDKASFLLEVIEYIQFLQ 753
                       899*************************9....9*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 991 aa     Download sequence    
MVFKSKMKWV GLLGLVLSAI SLFVHFLLAR FTEGGVSEYH SSITIFPRRT IGESLNFSKT  60
SPMYRRLWGP VRHLESLHPN ANPRGRYADP GSDTSGFIFV RIQGGFHEIR NSICDVVVVA  120
RFLNATLVIP EIQSTTSSKG ISSQFKSFAY LYNEDQFMAA LSKDVKVVKT LPKNLKGLRR  180
KKNIPLFKVP YSASPYYYKH HVLPILKKHL VVELVVSDGG CLQAILAPDL EEYQRLRCRV  240
AFHALRFRQE VQELATEILH RLRAPGQPFI AFDPGMTREA LAYHGCAELF QDVHTELIQH  300
KRHWMIKRGI VKGKLSVNSA EQRLNGSCPL MPEEIGIVLR AYGYLWDTII YVSGGEIFGG  360
QRTLIPLRAM FENVVDRTSL SMPWELSRIY GREANLVDRN PGSPPMIEEE MKIEAWKTAG  420
PRPRPLPPPP ARPKSYNIEG WWGWVAESDN EPDSTVMELR TNAHKLLWEA IDYVICVEAD  480
VFIPGFDLDG KGHPNFASLV MGHRLYQSAA SKTYRPDRKK VTKLLEEIRD HLYHANHTWL  540
MSVRKNLRKR LVDGLIEASA RSKPLSFISH PVPECSCLRH DPAGKSINAT TSDRTSTSTS  600
HSQVLAALGV VHYCPAWMEN DLTLQSKDKE NEETLDEDDS TSSGLFFRKN NGYHEGGNGD  660
LSNKEEIQLE DQEELEGGER NEANNELIGN LAVKVEGQGR EKNRSKHSET EQRRRSKINE  720
RFQMLRDLIP KNDQKRDKAS FLLEVIEYIQ FLQEKVNLYE GYQGWSPEPT KLMPWKNHNR  780
PGENFVDQSQ VMNNGSGHEN NAVVSPAMLP NTHNSVESDL GSGVVYKALD HIPGLATRSV  840
PNVQQQNIFD PIGSVGLPTQ PLQESISDAE NMTSNPPYQL WQGITSTTAS DDKLKKQDEN  900
SGSGSISSAY SQGVLNNLTQ ALQSSGVDLS QASISVQINV GSRVDSGLTS MASSSKAQLN  960
QSLNNQMTQT QVSSCDEDFE PAHKRFRTGE S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1892897DKLKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.14e-47bHLH family protein