PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g966620.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 991aa MW: 111307 Da PI: 7.4733 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 53.7 | 3.7e-17 | 704 | 753 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+Pk+ ++K +Ka+ L +++eYI+ Lq Pd.00g966620.m01 704 RSKHSETEQRRRSKINERFQMLRDLIPKN----DQKRDKASFLLEVIEYIQFLQ 753 899*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 991 aa Download sequence |
MVFKSKMKWV GLLGLVLSAI SLFVHFLLAR FTEGGVSEYH SSITIFPRRT IGESLNFSKT 60 SPMYRRLWGP VRHLESLHPN ANPRGRYADP GSDTSGFIFV RIQGGFHEIR NSICDVVVVA 120 RFLNATLVIP EIQSTTSSKG ISSQFKSFAY LYNEDQFMAA LSKDVKVVKT LPKNLKGLRR 180 KKNIPLFKVP YSASPYYYKH HVLPILKKHL VVELVVSDGG CLQAILAPDL EEYQRLRCRV 240 AFHALRFRQE VQELATEILH RLRAPGQPFI AFDPGMTREA LAYHGCAELF QDVHTELIQH 300 KRHWMIKRGI VKGKLSVNSA EQRLNGSCPL MPEEIGIVLR AYGYLWDTII YVSGGEIFGG 360 QRTLIPLRAM FENVVDRTSL SMPWELSRIY GREANLVDRN PGSPPMIEEE MKIEAWKTAG 420 PRPRPLPPPP ARPKSYNIEG WWGWVAESDN EPDSTVMELR TNAHKLLWEA IDYVICVEAD 480 VFIPGFDLDG KGHPNFASLV MGHRLYQSAA SKTYRPDRKK VTKLLEEIRD HLYHANHTWL 540 MSVRKNLRKR LVDGLIEASA RSKPLSFISH PVPECSCLRH DPAGKSINAT TSDRTSTSTS 600 HSQVLAALGV VHYCPAWMEN DLTLQSKDKE NEETLDEDDS TSSGLFFRKN NGYHEGGNGD 660 LSNKEEIQLE DQEELEGGER NEANNELIGN LAVKVEGQGR EKNRSKHSET EQRRRSKINE 720 RFQMLRDLIP KNDQKRDKAS FLLEVIEYIQ FLQEKVNLYE GYQGWSPEPT KLMPWKNHNR 780 PGENFVDQSQ VMNNGSGHEN NAVVSPAMLP NTHNSVESDL GSGVVYKALD HIPGLATRSV 840 PNVQQQNIFD PIGSVGLPTQ PLQESISDAE NMTSNPPYQL WQGITSTTAS DDKLKKQDEN 900 SGSGSISSAY SQGVLNNLTQ ALQSSGVDLS QASISVQINV GSRVDSGLTS MASSSKAQLN 960 QSLNNQMTQT QVSSCDEDFE PAHKRFRTGE S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 892 | 897 | DKLKKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 4e-47 | bHLH family protein |