PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g963950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Dof | ||||||||
Protein Properties | Length: 253aa MW: 28111.1 Da PI: 7.5948 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 84.9 | 7.7e-27 | 40 | 84 | 2 | 46 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGal 46 ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+ l Pd.00g963950.m01 40 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEASLL 84 6899************************************98755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MMHTLLQTKK ESGELDKPME DHEMGSNACP RSALEKRARP QEQLNCPRCN STNTKFCYYN 60 NYSLTQPRYF CKTCRRYWTE ASLLSKNNIP DLNPPSSLSH FSAHQNPRST HEGQDLNLAF 120 NAMEHYQQNP AAGASTSSSA PLSAMELLRT GIASRGVNSF IPNQNMADHS NTLYASSPGF 180 SLQEFKPNLG FCVDGLGNRY GDHEINGGRL LFPFGDLKQI SSSTAHHELD HHQNKGQGNP 240 TGYWNGLLGG GSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.2 | 3e-47 | Dof family protein |