PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g963370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 373aa MW: 41641.2 Da PI: 7.3966 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.5 | 7.4e-11 | 310 | 355 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k + ae+L +Ave+Ik+Lq Pd.00g963370.m01 310 SIAERMRRTRISERMKKLQDLFPNM----DKQINTAEMLDLAVEFIKDLQ 355 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MRYRSAPSSF LMDLVDNNGG VGCEDSRYLR PSSPEVETVL ARFMSSCNEP DHHDNGANSL 60 QHQFEERAVK QEAGDSVSKQ NGYSNSSHMM YQAQQVHALD NNSFAAINST GLENSMQSKI 120 GVGNRPNLVR QSSSPAGFFP DLIVDNGFNV MKDGVSFRAG NGINGEASPS STSRLNNQLN 180 FSSGPSSYPS RMPRIAEMEN GNMGDGSQQD QGLGNASNSH CISNFPNDSW DISSFNDLKR 240 GRNNDGNKFS NSTALETQNN DFGHRNHGLT HHLSLPKHFE MPAMEKFLQF EDSIPCKIRA 300 KRGFATHPRS IAERMRRTRI SERMKKLQDL FPNMDKQINT AEMLDLAVEF IKDLQKQVKV 360 QFQSMKNIIF DSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 8e-58 | bHLH family protein |