PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g962060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 740aa MW: 79966.7 Da PI: 5.8704

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g962060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.8	1.7e-31	313	370	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +D ynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k Pd.00g962060.m01 313 EDVYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGAHNHPK 370 7**************************************.*************85 PP
2	WRKY	102.8	2e-32	529	587	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+ Pd.00g962060.m01 529 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 587 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MAGIDDNVAI IGDWVPPSTS PRAFFSSMLV DDMGSRSMLE PPGSNKTAEF FLGSQEGDTN 60 GKNLSQGNDS GEELNEVGSF SEYKSNSRGG LVERIAARAG FNAPRLNTES IRSSDLSLNS 120 DIRSPYLTIP PGLSPTILLD SPVFLSNSLA QPSPTTGKFP FVSNGHSRSS TLMTEGPDKT 180 NFFEDINTSF AFKPIAESGS FFLGPTSKMG STSFPQQSFP SIEVSVQSEN SSQSIEPTKV 240 QNQNTNNLQL QADFSHTSTE KDNGANSADP RAFDTVGGST EHSPPLDEQP DEEGDQRGSG 300 DSMAAAAGGT PSEDVYNWRK YGQKQVKGSE YPRSYYKCTH PNCQVKKKVE RSHEGHITEI 360 IYKGAHNHPK PPPNRRSAAI GSSNPLNDMR PDIPEQGGPQ SGADGDLVWA STQKANVGAP 420 DWKHENLEVT SSASVGPDYC NQSSSMQAQN GTHLESGDVV DASSTFSNDE DEDDRGTHGS 480 VSLAYDGEGD ESESKRRKIE AYATEMSGAT RAIREPRVVV QTTSEVDILD DGYRWRKYGQ 540 KVVKGNPNPR SYYKCTNAGC TVRKHVERAS HDLKSVITTY EGKHNHDVPA ARNSSHVNSG 600 PSNTMSGQAS SAGIQTHPHR PEPSQVHNNM ARFERPSSLG SFSLPGRQQL GPSHGFSFGM 660 NQPGLANLAM AGLGPGQPKL PVMPVHHPYF AQQRQVNEMG FMLPKGEPKV EPMSESGLNM 720 SNGSSVYQQL MSRLPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MAGIDDNVAI IGDWVPPSTS PRAFFSSMLV DDMGSRSMLE PPGSNKTAEF FLGSQEGDTN  60
GKNLSQGNDS GEELNEVGSF SEYKSNSRGG LVERIAARAG FNAPRLNTES IRSSDLSLNS  120
DIRSPYLTIP PGLSPTILLD SPVFLSNSLA QPSPTTGKFP FVSNGHSRSS TLMTEGPDKT  180
NFFEDINTSF AFKPIAESGS FFLGPTSKMG STSFPQQSFP SIEVSVQSEN SSQSIEPTKV  240
QNQNTNNLQL QADFSHTSTE KDNGANSADP RAFDTVGGST EHSPPLDEQP DEEGDQRGSG  300
DSMAAAAGGT PSEDVYNWRK YGQKQVKGSE YPRSYYKCTH PNCQVKKKVE RSHEGHITEI  360
IYKGAHNHPK PPPNRRSAAI GSSNPLNDMR PDIPEQGGPQ SGADGDLVWA STQKANVGAP  420
DWKHENLEVT SSASVGPDYC NQSSSMQAQN GTHLESGDVV DASSTFSNDE DEDDRGTHGS  480
VSLAYDGEGD ESESKRRKIE AYATEMSGAT RAIREPRVVV QTTSEVDILD DGYRWRKYGQ  540
KVVKGNPNPR SYYKCTNAGC TVRKHVERAS HDLKSVITTY EGKHNHDVPA ARNSSHVNSG  600
PSNTMSGQAS SAGIQTHPHR PEPSQVHNNM ARFERPSSLG SFSLPGRQQL GPSHGFSFGM  660
NQPGLANLAM AGLGPGQPKL PVMPVHHPYF AQQRQVNEMG FMLPKGEPKV EPMSESGLNM  720
SNGSSVYQQL MSRLPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein