PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g956660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 358aa MW: 40121.1 Da PI: 9.3807 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 71.7 | 8.5e-23 | 20 | 85 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+++ + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg Pd.00g956660.m01 20 RKQKSLGLLCSNFLGLYNRDGVTSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLARKAKNQYSWKG 85 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 81.6 | 6.8e-26 | 151 | 231 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+e++++l++vak L+ + +++k+RRiYDi+NVL+++nliek ++k++++w g Pd.00g956660.m01 151 RREKSLALLTQNFVKLFVCSTEEMISLDDVAKLLLGDaqsasAMRTKVRRIYDIANVLSSMNLIEKthtpdTRKPAFKWLG 231 689*******************************************************************99*******87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 358 aa Download sequence |
MATPAAPPSG PSTRKHGYSR KQKSLGLLCS NFLGLYNRDG VTSIGLDDAA SRLGVERRRI 60 YDIVNVLESV GVLARKAKNQ YSWKGFGAIP NALQELREEG LRENCINFAG NDDAKVSDDE 120 DDEERCGSQP NDKSNPTVNP QPPADQKPDN RREKSLALLT QNFVKLFVCS TEEMISLDDV 180 AKLLLGDAQS ASAMRTKVRR IYDIANVLSS MNLIEKTHTP DTRKPAFKWL GLRGKEENLV 240 PNESRKRAFG TDITNVISKR GKLESSIGGE LDAQKQRQHD LEDSKDGSKS YQFGPFAPVT 300 IARPGNSNMR RVHDWEKLTS TYRPQYQNQA LKDLFSHYME AWKSWYSEVA GKNPIRIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-138 | E2F/DP family protein |