PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g955130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 460aa    MW: 51619.4 Da    PI: 6.7283
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g955130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-183181155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  Pd.00g955130.m01 31 CKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAAYLLRG 81
                      799*******.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MEEEHEEAPK QQKENGVSVS ANKQSQLKTK CKFVGVRQRP SGKWVAEIKD TTKKIRMWLG  60
TFETAEEAAR AYDEAAYLLR GSNTRTNFST HVPSNSPLSL KIRNLLNHKK SLNLKQKQSP  120
PPTPNSSLKS TPIAATTTRI SSGSSICSGN IQAFSDTSSD NCNANSSSSL PCYKSQDIQA  180
FDDAYRPDLS NCIGELQPAM FHLDQSWPFL AGFDQLPLTH EGMDLTKGID QAGMQDLGAN  240
AGDFDDDEGG GLFFTYSILM AKKEFANLEY RSDMLKFHRV MERIRENVRE SHVELFRQTP  300
FWGLFSSYHG GLIIEDAHRK SDIDIVSILK CFDKGENAFF FGEITARITE TDISKLFGLP  360
CDGEVINLHK KKKNLGNGFI ERRLGGYKTV RKRLLEDQIL KVVNLHGCVE EKDLDKMPTY  420
AWAIAAKEYL QNSLLNMNSV ESACGCVVSL LFWVCEYTID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-29ERF family protein