PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g954260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 626aa MW: 69887.8 Da PI: 10.41 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32 | 2.8e-10 | 11 | 62 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwq 45 +W t E++llv+av+++G+++W+++a +++ + +t+ +c++++ Pd.00g954260.m01 11 PWGTLEELLLVCAVNRHGTKSWDSVAMEVQtkssstfasTLLTAQDCRDKFD 62 7************************************99999*****99985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 626 aa Download sequence |
MAREHGTSGH PWGTLEELLL VCAVNRHGTK SWDSVAMEVQ TKSSSTFAST LLTAQDCRDK 60 FDDLKRRFVS KNDNQSHSLG QMVDELRNLR VDELRHEVHR RDVSIVSLEL KVKRLEEERE 120 RSLKEEAEAH PNNDLQSGGE DQLEASPENI AGETNSGEDF DSDERENRSF NESNSTSQRG 180 EAKENSVEDN KKGGETVGAT QLGESNEFWE SVSESKREGK RGGVASKQNS DVQSSASLSK 240 RKRQAEGDEV SPATSKGIKP KLVKHEPLIK VLRIIRSHRL GSVFERRLRS QESDRYKSLI 300 RQHMDLHEVQ SRLNKGVYTD CTHKFFRDLL LLFNNAVVFL RKTSPEHMAA QELRSIVLKE 360 MKDQLQKPKP AIDTVKLHAP KLESKVPKIE PDSSVKPSKP SVVACGLRRS ANGGGGAKNR 420 KGDKKERGEV EEKGKASEVE DKGIRKKRTQ ERGGRRGSRR DSSKNVGKTE HAYGGNELSS 480 HDGLEEMKME KIENAKMTKQ GAARTFLKRM KQNSTSIEVK RGTSDVSEGG ESEDSMVEED 540 EKKQKGKTKP DERKKRVTRS STGRRGGRGG GRRDEESSGR AKRGVGRPPK RPETAEAGNG 600 SGKRGRGNGE ADQMGSAGRP RKRTRR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 543 | 555 | KQKGKTKPDERKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44430.1 | 9e-44 | MYB_related family protein |