PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g951940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 393aa    MW: 44288.5 Da    PI: 6.3209
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g951940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-11249291855
                       HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        Er+RR+++N++f  Lr+++P+       K++K++ L  Av YI++L+
  Pd.00g951940.m01 249 QERQRREKLNHRFYVLRSVVPNV-----SKMDKSSLLADAVSYINQLK 291
                       7*********************6.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MEEIISSCSS PNFGPESPAI FQQRLQFLVQ NRPECWVYSI FWRASKDSNG QVALSWGAGD  60
FQIGRDLASK TTNKVTNNYQ PKFGLTKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE  120
WFYFYSVSLT QSFAAGHATN NILGRAFCSG VFFWLAGVHE LQFYECERVK EARMHGIQTL  180
VCIATSCGVL ELASVDVIKE NLGLIHLSIS LFGSDNNRVS QQGSRDSDVL VPPLENGMFV  240
GVQKELTRQE RQRREKLNHR FYVLRSVVPN VSKMDKSSLL ADAVSYINQL KAKVEELEAK  300
IQEQPPTPKT VVPVEVDVKI MGSEAIIRVQ CPDQDYPYAR LMNALKGLGL QVYHASISSV  360
KELMIQDVVA RVPYGFNSDQ EAMRTAIMKR WHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.19e-45bHLH family protein