PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g951900.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 483aa    MW: 54312.9 Da    PI: 7.8065
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g951900.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.8e-11308354455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pd.00g951900.m02 308 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 354
                       799***********************6.....5*****************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD  60
FQVNSDLASK RNNKVTNNHQ PKFGFNKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE  120
WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL  180
VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNN RDSQQKGGRE GNVLAPLLEN  240
GIFSGSQKKL TRQAGTKEAA RFNIGGSSPE SLSGSVGNFT CENTENTRSK KRRRSSNNGA  300
SRESSLLNHV EAERQRREKL NHRFYLLRSV VPNVSKMDRS SLLADAVAYI NQLKAKVEEL  360
ELKTQAQPQN PKRVSVNNLD NQCSQSTSSI VDHHSSYNNT KVVPVEVDVK IMGSEAIIRV  420
QCPDQDYPYA RLMNALKGLG LQVYHASISS VKELMIQDVV ARVPYGFTSE EAMRIGIIKR  480
WHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.13e-58bHLH family protein