PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g951900.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 483aa MW: 54312.9 Da PI: 7.8065 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.5 | 1.8e-11 | 308 | 354 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g951900.m02 308 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 354 799***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 483 aa Download sequence |
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD 60 FQVNSDLASK RNNKVTNNHQ PKFGFNKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL 180 VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNN RDSQQKGGRE GNVLAPLLEN 240 GIFSGSQKKL TRQAGTKEAA RFNIGGSSPE SLSGSVGNFT CENTENTRSK KRRRSSNNGA 300 SRESSLLNHV EAERQRREKL NHRFYLLRSV VPNVSKMDRS SLLADAVAYI NQLKAKVEEL 360 ELKTQAQPQN PKRVSVNNLD NQCSQSTSSI VDHHSSYNNT KVVPVEVDVK IMGSEAIIRV 420 QCPDQDYPYA RLMNALKGLG LQVYHASISS VKELMIQDVV ARVPYGFTSE EAMRIGIIKR 480 WHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00870.1 | 3e-58 | bHLH family protein |