PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g951650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 236aa    MW: 25791.3 Da    PI: 8.2074
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g951650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-1179126454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  Pd.00g951650.m01  79 SKACREKLRRDRLNDKFLELGSILEPG---RPPKTDKAAILVDAVRMVNQL 126
                       5678**********************8...89***************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVSPENTNWL FDYGLIDDTP VLDGNFPVSS SGFTWPVQPL AGSSSVSVEI DGSLGDAEGV  60
KESGSKKRVR TESCSGSSSK ACREKLRRDR LNDKFLELGS ILEPGRPPKT DKAAILVDAV  120
RMVNQLRGEA QKLKDSNSSL QEKIKELKAE KNELRDEKQR LKLEKEKLEQ QLKAMNAQPG  180
FLPPPPAIPA AFAAQGQAHG NKLVPFIGYP GVAMWQFMPP ASVDTSQDHV LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-91bHLH family protein