PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g949980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 547aa MW: 59773.8 Da PI: 6.5439

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g949980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94	1.1e-29	314	372	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g949980.m01 314 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGtGCPVRKQVQRCAEDRTILVTTYEGHHNHP 372 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MESAASDHSI HNCRSIEQPL LSPETAVDHD HHGKRIVDEL DFFADNKGRL MEMRDQTVEV 60 KEEAAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHHNME DKHRTNELAV 120 LQAELGRMNV ENQRLRVMIN QVNNNYQALQ VQIVTLMQRQ QNQKADHQTP EQHKMINNGS 180 VVVEEKQMMN GFNHIVPRQF MDMGRAEKDE LSQCSLEGCR SQDCSGSPPR NDIVESMECC 240 RSTSHVLHRD LSGRISTTNG GEDGPDQEFQ GWVPKKVSKM MSPRDVDQAS SETMSMIKKA 300 RVSVRARSEA SMISDGCQWR KYGQKMAKGN PCPRAYYRCT MGTGCPVRKQ VQRCAEDRTI 360 LVTTYEGHHN HPLPPAAMAM ASTTSAAASM LLSGSMPSAD GLISSNSFLA RSALPNCPPS 420 LATLSASAPF PTVTLDLTRT PTSSEMPLGQ PNQLPPSFPQ NMTSVPQILG QALSSQSKFS 480 VLDSFQGLDS ATHSLADKVN AATAAITADP NFTAALVAAI TSIVGNVHSN NNTNGNITTR 540 NNSDSNT

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MESAASDHSI HNCRSIEQPL LSPETAVDHD HHGKRIVDEL DFFADNKGRL MEMRDQTVEV  60
KEEAAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHHNME DKHRTNELAV  120
LQAELGRMNV ENQRLRVMIN QVNNNYQALQ VQIVTLMQRQ QNQKADHQTP EQHKMINNGS  180
VVVEEKQMMN GFNHIVPRQF MDMGRAEKDE LSQCSLEGCR SQDCSGSPPR NDIVESMECC  240
RSTSHVLHRD LSGRISTTNG GEDGPDQEFQ GWVPKKVSKM MSPRDVDQAS SETMSMIKKA  300
RVSVRARSEA SMISDGCQWR KYGQKMAKGN PCPRAYYRCT MGTGCPVRKQ VQRCAEDRTI  360
LVTTYEGHHN HPLPPAAMAM ASTTSAAASM LLSGSMPSAD GLISSNSFLA RSALPNCPPS  420
LATLSASAPF PTVTLDLTRT PTSSEMPLGQ PNQLPPSFPQ NMTSVPQILG QALSSQSKFS  480
VLDSFQGLDS ATHSLADKVN AATAAITADP NFTAALVAAI TSIVGNVHSN NNTNGNITTR  540
NNSDSNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-105	WRKY family protein