PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g949530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 240aa    MW: 26346.3 Da    PI: 8.4718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g949530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.5e-203180255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  Pd.00g949530.m01 31 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARILRG 80
                      69*******.**********883....5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MRRGRGAAAR AAAATPAQPA GSRPNIAHEV RYRGVRKRPW GRFAAEIRDP WKKTRVWLGT  60
FDSAEDAARA YDAAARILRG PKAKTNFPIS CAYPPPFYNN PTDQAIETKL FGSGYGFQDH  120
PVVDPQRPTS SSLSSTVESF SGPRPPPQST TIAAESSRRK RQPRTPPVVP EDCHSDCDSS  180
SSVVEDDGDF AASSSFRKTL LPFDLNFPPL DEEGELGGGD GQDLRWFDGI WNSSVFMFLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.14e-29ERF family protein