PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g947580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 1028aa MW: 114384 Da PI: 6.8585

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g947580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.7	9.1e-40	141	218	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++ v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g947580.m01 141 VCQVEDCKADLSHAKDYHRRHKVCDMHSKATKARVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 218 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1028 aa Download sequence
MFLRLFRSEV GNFACDGIEG CEYGVVEDVE GLSGARNFYG PMVSDLKAVG KKSLEWDLND 60 CKWDGDLFTA SPLNSIPSDF RSRQLFPVQP ETPSNAENEE LNNEAGSLNL KLGEQAYPIM 120 EGEVQTGKKT KIVGTTLNRA VCQVEDCKAD LSHAKDYHRR HKVCDMHSKA TKARVGNVLQ 180 RFCQQCSRFH VLQEFDEGKR SCRRRLAGHN RRRRKTHPDP VVNGGSLNDE RGSSYLLISL 240 LRILSNMQSN SSDQTKDQDL LSHLLRSLAN LAGTVDGRSI SALLPGSQGL LNSGPSVQTA 300 QKVPDTVSNG CEPSRPSVSA SKRDDCVNLE DPLRPIRQCP TVPASDLLQK RISSVDADHR 360 SLQVVSGIQA AKPLPSRDSV PSKSVAPDAT MGRMQLNGID LNNTYDDSQD YLENLGSSHS 420 PVNPGTVSLG FPLWMQQESQ KSSPPQTSGT SDSTSTQSPS TSSGEGQSRT DRIVFKLFGK 480 DPNDLPFVLR SQILDWLSHS PSDIESYIRP GCIILTIYLR LEKSTWEELC CHLGSNLKRL 540 LHAANDPFWT TGWVYTRVQQ NVAFTYNGQV VLDTPLPLKS HKNCRISYIK PIAVSLSERA 600 QFVVKGFNLS RSTTRLLCAL EGKYLAQETC YDLMDSADTT VEHDEQHCLR FSCSIPNVTG 660 RGFIEVEDHG LSSSFFPFIV AEQEVCSEIC MLEGVIEVAE TADDIQREPE KLEAKNLAMD 720 FIHELGWLLH RSHTKFRLGH MDPNLDLFPF RRFRLLMEFS MDHDWCAVVK KLLGILFEGN 780 VDAGEHPSIE LGLLDMSLLH RAVRRKCRSM VELLLRFVPD KGLDKTGSEQ KQQVDRDGNN 840 FLFKPDAVGP MGLTPLHVAA STDGCEIILD ALTDDPGKVG IEAWKYARDS TGLTPNDYAC 900 LRGRYSYLHI VQRKISKKLE SGQVVLDIPG TILDSNSKQK QSDGHKSSKV ASLETEKIEI 960 KAMQGHCKLC EMKLAYGNTR SLVYRPAMLS MVAIAAVCVC VALLFKSSPE VVYVFQPFRW 1020 ELLKYGPS

Sequence ? help Back to Top

Protein Sequence Length: 1028 aa Download sequence

MFLRLFRSEV GNFACDGIEG CEYGVVEDVE GLSGARNFYG PMVSDLKAVG KKSLEWDLND  60
CKWDGDLFTA SPLNSIPSDF RSRQLFPVQP ETPSNAENEE LNNEAGSLNL KLGEQAYPIM  120
EGEVQTGKKT KIVGTTLNRA VCQVEDCKAD LSHAKDYHRR HKVCDMHSKA TKARVGNVLQ  180
RFCQQCSRFH VLQEFDEGKR SCRRRLAGHN RRRRKTHPDP VVNGGSLNDE RGSSYLLISL  240
LRILSNMQSN SSDQTKDQDL LSHLLRSLAN LAGTVDGRSI SALLPGSQGL LNSGPSVQTA  300
QKVPDTVSNG CEPSRPSVSA SKRDDCVNLE DPLRPIRQCP TVPASDLLQK RISSVDADHR  360
SLQVVSGIQA AKPLPSRDSV PSKSVAPDAT MGRMQLNGID LNNTYDDSQD YLENLGSSHS  420
PVNPGTVSLG FPLWMQQESQ KSSPPQTSGT SDSTSTQSPS TSSGEGQSRT DRIVFKLFGK  480
DPNDLPFVLR SQILDWLSHS PSDIESYIRP GCIILTIYLR LEKSTWEELC CHLGSNLKRL  540
LHAANDPFWT TGWVYTRVQQ NVAFTYNGQV VLDTPLPLKS HKNCRISYIK PIAVSLSERA  600
QFVVKGFNLS RSTTRLLCAL EGKYLAQETC YDLMDSADTT VEHDEQHCLR FSCSIPNVTG  660
RGFIEVEDHG LSSSFFPFIV AEQEVCSEIC MLEGVIEVAE TADDIQREPE KLEAKNLAMD  720
FIHELGWLLH RSHTKFRLGH MDPNLDLFPF RRFRLLMEFS MDHDWCAVVK KLLGILFEGN  780
VDAGEHPSIE LGLLDMSLLH RAVRRKCRSM VELLLRFVPD KGLDKTGSEQ KQQVDRDGNN  840
FLFKPDAVGP MGLTPLHVAA STDGCEIILD ALTDDPGKVG IEAWKYARDS TGLTPNDYAC  900
LRGRYSYLHI VQRKISKKLE SGQVVLDIPG TILDSNSKQK QSDGHKSSKV ASLETEKIEI  960
KAMQGHCKLC EMKLAYGNTR SLVYRPAMLS MVAIAAVCVC VALLFKSSPE VVYVFQPFRW  1020
ELLKYGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein