PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g939950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 352aa    MW: 38956.2 Da    PI: 4.6684
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g939950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.2e-28122183159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++++ dp+++++tY+geH+++
  Pd.00g939950.m01 122 LDDGYSWRKYGQKDILGATYPRGYYRCTHRgtqGCLATKQVQKADADPSTMVVTYRGEHTCS 183
                       59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEWEQKTLTS ELTQGKELAK QLMNYLHPSA SQEKRDFLIS KILFSYEKAL SLLKRDVGSD  60
GESNHIPNTM LESPTSLGNG SPMSEISDQD CKNKNVFKKR KTMPRWTEEM KVCSGTGLDG  120
SLDDGYSWRK YGQKDILGAT YPRGYYRCTH RGTQGCLATK QVQKADADPS TMVVTYRGEH  180
TCSQVLQLAR SSALSLAKQA STGNQNATRE AEKPKASQEM SFSFGAGLRV KTEDLDTRED  240
DIFPSFSFPS TPIEPENVGD HIFCATLMEN DLMDGYSPTF ASPAATFEPD YLQATSSFGL  300
GLDYVQTSES GLSEIISAPT SVTNSPIGDF GFSLDDLDFH HFENPESFAY ES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.19e-44WRKY family protein