PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g939940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 92aa    MW: 11005.6 Da    PI: 9.7547
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g939940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-072968445
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E++l+ +  k+ G + W +Ia +++ gR ++++  +w+
  Pd.00g939940.m01 29 MSEQEEDLICRMYKLVGDR-WGLIAGRIP-GRKAEEIERFWL 68
                      799**************99.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MDKRRRKQAK TSTCCSEEVS SIEWEFINMS EQEEDLICRM YKLVGDRWGL IAGRIPGRKA  60
EEIERFWLMR HGEVFASRRR TELKSSSKRY NS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
128DKRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.16e-43MYB_related family protein