PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g939430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 615aa MW: 67729 Da PI: 6.3756

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g939430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5.1e-13	444	490	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq Pd.00g939430.m01 444 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 490 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MKIEMGLGGG VWNDGDKAMV AAVLGTRAFD YLISSSVSSN ENSCMGIGTD ENLHNKLSDL 60 VEPPNASNFS WNYAIFWQIS RSKSGDWALC WGDGSCREPK EGEESEATRN LNLRLEDETQ 120 QTMRKIVLQK LHTLFGSSDE YNGALGLDRV TDTEMFLLAS MYFSFPRGEG GPGKCFASGK 180 HVWLSDLLKS ESDYCVRSFL AKSAGVQTIV LVPTDVGVVE LGSVRCVGES LELLQSIRSL 240 FSTQSSLMRS KPLTGFPVMG KRRDENAQLT NLSPVERGEG VPKIFGQDLN SGNSGRPRYR 300 EKLAVRKVEE RPWDVYSNGN RIAFSSPRNG IQGSSWPHIH DAKQGSPIEM YASQSPVNNI 360 QELVNGVRDD FRLNHYQPQK QVPMQIDFSG ATSRPSVVAR PVGADSENSD AEAPCKEERP 420 GTVDERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG 480 DAIAYINELQ AKLKVMEADR ENLGGTSRDA SALGANPGIS MENQSQATDV DIQAVHDEVV 540 VRVSCPLDSH PASRVIQAFK EAQITVVESK LDAANDTVFH TFVIKSQGSE PLTKEKLIAA 600 FSRESNSLQS LSSVG

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MKIEMGLGGG VWNDGDKAMV AAVLGTRAFD YLISSSVSSN ENSCMGIGTD ENLHNKLSDL  60
VEPPNASNFS WNYAIFWQIS RSKSGDWALC WGDGSCREPK EGEESEATRN LNLRLEDETQ  120
QTMRKIVLQK LHTLFGSSDE YNGALGLDRV TDTEMFLLAS MYFSFPRGEG GPGKCFASGK  180
HVWLSDLLKS ESDYCVRSFL AKSAGVQTIV LVPTDVGVVE LGSVRCVGES LELLQSIRSL  240
FSTQSSLMRS KPLTGFPVMG KRRDENAQLT NLSPVERGEG VPKIFGQDLN SGNSGRPRYR  300
EKLAVRKVEE RPWDVYSNGN RIAFSSPRNG IQGSSWPHIH DAKQGSPIEM YASQSPVNNI  360
QELVNGVRDD FRLNHYQPQK QVPMQIDFSG ATSRPSVVAR PVGADSENSD AEAPCKEERP  420
GTVDERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG  480
DAIAYINELQ AKLKVMEADR ENLGGTSRDA SALGANPGIS MENQSQATDV DIQAVHDEVV  540
VRVSCPLDSH PASRVIQAFK EAQITVVESK LDAANDTVFH TFVIKSQGSE PLTKEKLIAA  600
FSRESNSLQS LSSVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	426	434	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein